USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: RS5_HUMAN USC-OGP 2-DE database:  RS5_HUMAN RS5_HUMAN General information about the entry View entry in simple text format Entry name RS5_HUMAN Primary accession number P46782 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=40S ribosomal protein S5; AltName: Full=Small ribosomal subunit protein uS7 {ECO:0000303|PubMed:24524803}; Contains: RecName: Full=40S ribosomal protein S5, N-terminally processed;. Gene name Name=RPS5 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1305: pI=4.71; Mw=22379 Cross-references UniProtKB/Swiss-Prot P46782; RS5_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RS5_HUMAN Primary accession number P46782 Secondary accession number(s) B2R4T2 Q96BN0 Sequence was last modified on  January 23, 2007 (version 4) Annotations were last modified on  March 15, 2017 (version 169) Name and origin of the protein Description RecName: Full=40S ribosomal protein S5; AltName: Full=Small ribosomal subunit protein uS7 {ECO:0000303|PubMed:24524803}; Contains: RecName: Full=40S ribosomal protein S5, N-terminally processed; Gene name Name=RPS5 Encoded on Name=RPS5 Keywords 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U14970; AAA85658.1; -; mRNA EMBL AB061853; BAB79493.1; -; Genomic_DNA EMBL AK311938; BAG34879.1; -; mRNA EMBL CH471135; EAW72581.1; -; Genomic_DNA EMBL BC015405; AAH15405.1; -; mRNA EMBL BC018151; AAH18151.1; -; mRNA EMBL AB007149; BAA25815.1; -; Genomic_DNA CCDS CCDS12978.1; -; . PIR S55916; S55916; . RefSeq NP_001000.2; NM_001009.3; . UniGene Hs.378103; -; . PDB 4UG0; EM; -; SF=1-204 PDB 4V6X; EM; 5.00 A; AF=1-204 PDB 5A2Q; EM; 3.90 A; F=1-204 PDB 5AJ0; EM; 3.50 A; BF=1-204 PDB 5FLX; EM; 3.90 A; F=1-204 PDB 5T2C; EM; 3.60 A; As=1-204 PDBsum 4UG0; -; . PDBsum 4V6X; -; . PDBsum 5A2Q; -; . PDBsum 5AJ0; -; . PDBsum 5FLX; -; . PDBsum 5T2C; -; . ProteinModelPortal P46782; -; . SMR P46782; -; . BioGrid 112107; 179; . IntAct P46782; 28; . MINT MINT-1142463; -; . STRING 9606.ENSP00000196551; -; . iPTMnet P46782; -; . PhosphoSitePlus P46782; -; . SwissPalm P46782; -; . BioMuta RPS5; -; . SWISS-2DPAGE P46782; -; . EPD P46782; -; . MaxQB P46782; -; . PaxDb P46782; -; . PeptideAtlas P46782; -; . PRIDE P46782; -; . TopDownProteomics P46782; -; . DNASU 6193; -; . Ensembl ENST00000196551; ENSP00000196551; ENSG00000083845; . Ensembl ENST00000596046; ENSP00000472985; ENSG00000083845; . Ensembl ENST00000601521; ENSP00000470114; ENSG00000083845; . GeneID 6193; -; . KEGG hsa:6193; -; . UCSC uc002qsn.4; human; . CTD 6193; -; . GeneCards RPS5; -; . H-InvDB HIX0020415; -; . HGNC HGNC:10426; RPS5; . HPA HPA055878; -; . HPA HPA061979; -; . MIM 603630; gene; . neXtProt NX_P46782; -; . OpenTargets ENSG00000083845; -; . PharmGKB PA34841; -; . eggNOG KOG3291; Eukaryota; . eggNOG COG0049; LUCA; . GeneTree ENSGT00390000010806; -; . HOGENOM HOG000039066; -; . HOVERGEN HBG028547; -; . InParanoid P46782; -; . KO K02989; -; . PhylomeDB P46782; -; . TreeFam TF300872; -; . Reactome R-HSA-156827; L13a-mediated translational silencing of Ceruloplasmin expression; . Reactome R-HSA-156902; Peptide chain elongation; . Reactome R-HSA-1799339; SRP-dependent cotranslational protein targeting to membrane; . Reactome R-HSA-192823; Viral mRNA Translation; . Reactome R-HSA-2408557; Selenocysteine synthesis; . Reactome R-HSA-6791226; Major pathway of rRNA processing in the nucleolus and cytosol; . Reactome R-HSA-72649; Translation initiation complex formation; . Reactome R-HSA-72689; Formation of a pool of free 40S subunits; . Reactome R-HSA-72695; Formation of the ternary complex; and subsequently; the 43S complex Reactome R-HSA-72702; Ribosomal scanning and start codon recognition; . Reactome R-HSA-72706; GTP hydrolysis and joining of the 60S ribosomal subunit; . Reactome R-HSA-72764; Eukaryotic Translation Termination; . Reactome R-HSA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC); . Reactome R-HSA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC); . ChiTaRS RPS5; human; . GeneWiki RPS5; -; . GenomeRNAi 6193; -; . PRO PR:P46782; -; . Proteomes UP000005640; Chromosome 19; . Bgee ENSG00000083845; -; . CleanEx HS_RPS5; -; . ExpressionAtlas P46782; baseline and differential; . Genevisible P46782; HS; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0031012; C:extracellular matrix; IDA:BHF-UCL; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0030529; C:intracellular ribonucleoprotein complex; IDA:MGI; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0003729; F:mRNA binding; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003735; F:structural constituent of ribosome; IDA:UniProtKB; . GO GO:0000184; P:nuclear-transcribed mRNA catabolic process; nonsense-mediated decay; TAS:Reactome GO GO:0006450; P:regulation of translational fidelity; IGI:UniProtKB; . GO GO:0006364; P:rRNA processing; TAS:Reactome; . GO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome; . GO GO:0006412; P:translation; IGI:UniProtKB; . GO GO:0006413; P:translational initiation; IC:UniProtKB; . GO GO:0019083; P:viral transcription; TAS:Reactome; . CDD cd14867; uS7_Eukaryote; 1; . Gene3D 1.10.455.10; -; 1; . InterPro IPR000235; Ribosomal_S5/S7; . InterPro IPR005716; Ribosomal_S5/S7_euk/arc; . InterPro IPR020606; Ribosomal_S7_CS; . InterPro IPR023798; Ribosomal_S7_dom; . PANTHER PTHR11205; PTHR11205; 1; . PANTHER PTHR11205:SF30; PTHR11205:SF30; 1; . Pfam PF00177; Ribosomal_S7; 1; . PIRSF PIRSF002122; RPS7p_RPS7a_RPS5e_RPS7o; 1; . SUPFAM SSF47973; SSF47973; 1; . TIGRFAMs TIGR01028; uS7_euk_arch; 1; . PROSITE PS00052; RIBOSOMAL_S7; 1; .

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